Source Code for Module modelmage.unCellDesign

 1  #-----------------------------------------------# 
 2  #                  modelMaGe                    # 
 3  #                                               # 
 4  #                 v1.0beta September 2009           # 
 5  #       Joerg Schaber, Max Floettmann and Jian Li   # 
 6  #                                               # 
 7  #                http://modelmage.org               # 
 8  #-----------------------------------------------# 
 9  ## @file    unCellDesign.py 
10  ## @brief   Removes Celldesigner tags from CellDesinger XML files. 
11  ## @author  Max Floettmann 
12  ##  
13  ## This file is part of modelMaGe.  Please visit http://modelMaGe.org for more 
14  ## information about modelMaGe, and the latest version of modelMaGe. 
15  ## 
16   
17  import re, sys, os 
18   
19 -class unCellDesign(): 
20 -        def __init__(self, input): 
21                  if os.path.exists(input): 
22                          self.input = open(input, 'r').read() 
23                  else: 
24                          self.input = input 
25                  self.r1 = '(?:(?:\n?<celldesigner[^>]*?>)|(?:\n?</celldesigner[^>]*?>))*' # multiline 
26                  self.r2 = '<celldesigner[^>]*?>.*?</celldesigner[^>]*?>' # single line 
27   
28 -        def __removeTags(self, file): 
29                  newString = re.sub(self.r1,'',file) 
30                  newString = re.sub(self.r2,'',newString) 
31                  return newString 
32           
33 -        def isCellDesign(self): 
34                  return not self.input.find('celldesigner') in [-1] 
35           
36 -        def convert(self): 
37                  newString = self.__removeTags(self.input) 
38                  return newString 
39                   
40 -        def write(self, output): 
41                  newf = open(output, 'w') 
42                  newf.write(newString) 
43                  newf.close() 
44